Understanding the assembly of mitochondrial machines
|Dr David Stroudfirstname.lastname@example.org||+61 3 834 47316||View page|
In humans, OXPHOS takes place on the five membrane protein complexes comprising the respiratory chain. These large multi-subunit complexes are together comprised of 93 subunits that are encoded by both mitochondrial (mt) and nuclear DNA. Mutations in all mtDNA protein coding genes and >180 nuclear genes impair OXPHOS and cause classical mitochondrial disease, however many of these genes do not encode subunits of the respiratory chain but rather proteins involved in OXPHOS biogenesis known as assembly factors. Although we have a good understanding of the enzymatic roles of each complex in OXPHOS, we still do not fully understand how the system is built and maintained, nor the specific roles of many subunits and assembly factors in this process.
With our collaborator Professor Mike Ryan (Monash University) we developed a novel systems approach, coupling CRISPR/Cas9 based gene-editing with quantitative proteomics tools, to study the assembly pathway of complex I and discover new assembly factors (Stroud et al., Nature 2016). Our lab is now applying this approach to the remaining members of the respiratory chain, complexes II-V (Figure 1).
In addition to extensive gene-editing and quantitative proteomics tools, this project relies heavily on classical molecular techniques such as mammalian cell culture, Blue-Native (BN) PAGE, western blotting, affinity enrichment techniques such as co-immunoprecipitation and BioID, cellular imaging, computational and structural biology, and metabolic measurements such as oxygen consumption and ATP production.
This research project is available to PhD, Honours students to join as part of their thesis.
Please contact the Research Group Leader to discuss your options.
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